PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EPS74590.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Genlisea
Family bHLH
Protein Properties Length: 107aa    MW: 12251.9 Da    PI: 5.2614
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EPS74590.1genomeLSMUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.29.2e-113078455
                HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH  4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                ah+ +Er RR++i +++  L++l+P +   ++    Ka +L + ++Y++sLq
  EPS74590.1 30 AHSLAERVRREKISERMKILQSLVPGC---SKVVTGKAVMLDEIINYVQSLQ 78
                8**************************...8888*****************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474595.1E-182396IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.85E-92482No hitNo description
PROSITE profilePS5088815.4472677IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000108.5E-83078IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.5E-173095IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003532.3E-113283IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 107 aa     Download sequence    Send to blast
QEDNEEEDEE EAPPKDYIHV RARRGQATDA HSLAERVRRE KISERMKILQ SLVPGCSKVV  60
TGKAVMLDEI INYVQSLQRQ VEFLSMKLAT INQRVVMNTE TPVSKDV
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012481609.16e-51PREDICTED: transcription factor bHLH62
SwissprotQ9SRT22e-48BH062_ARATH; Transcription factor bHLH62
TrEMBLS8D5856e-74S8D585_9LAMI; Uncharacterized protein (Fragment)
STRINGSolyc09g097870.2.13e-50(Solanum lycopersicum)
STRINGPGSC0003DMT4000427913e-50(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA41162345
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G07340.16e-49bHLH family protein
Publications ? help Back to Top
  1. Leushkin EV, et al.
    The miniature genome of a carnivorous plant Genlisea aurea contains a low number of genes and short non-coding sequences.
    BMC Genomics, 2013. 14: p. 476
    [PMID:23855885]